Return to main results Retrieve Phyre Job Id

Job DescriptionP31061
Confidence99.74%DateThu Jan 5 11:46:57 GMT 2012
Rank1Aligned Residues68
% Identity99%Templated1j9ia_
SCOP infoPutative DNA-binding domain Putative DNA-binding domain Terminase gpNU1 subunit domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60........
Predicted Secondary structure 

























Query SS confidence 



































































Query Sequence  MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEE
Query Conservation 
 


 


 




 


  
   
 

   
  
    



 

          
          
Alig confidence 



































































Template Conservation 
 


 


   



 


 
   
 

   

 
    





  

  
 

       

   
Template Sequence  MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEE
Template Known Secondary structure 
TT

TTTT


SS


SSS

TTTGGGGGGGGGGSSS

Template Predicted Secondary structure 


























Template SS confidence 



































































   1........10.........20.........30.........40.........50.........60........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions