 |
Job Description | P31061 | Confidence | 64.94% | Date | Thu Jan 5 11:46:57 GMT 2012 |
Rank | 176 | Aligned Residues | 18 |
% Identity | 22% | Template | c2vi6F_ |
PDB info |
PDB header:transcription | Chain: F: PDB Molecule:homeobox protein nanog; |
PDBTitle: crystal structure of the nanog homeodomain
|
Resolution | 2.6 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | Q | L | A | D | I | F | G | A | S | I | R | T | I | Q | N | W |
Query Conservation |   |
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |
|
Template Sequence |   |
M | Q | E | L | S | S | I | L | N | L | S | Y | K | Q | V | K | T | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|