Job Description P31061 Confidence 51.74% Date Thu Jan 5 11:46:57 GMT 2012 Rank 277 Aligned Residues 68 % Identity 16% Template c2pjpA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		N	K	K	Q	L	A	D	I	F	G	A	S	I	R	T	.	.	.	.	I	Q	N	W	Q	E	Q	G	M	P	V	L	R	G	G	G	K	G	N	E	V	L	Y	D	S	A	A	V	I	R	W	Y	A	E	R	D	A	E	I	E	N	E	K	L	R	R	E	V	E	E	L	R	Q	A	S	E	T	D
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																		.	.	.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		W	V	R	D	L	A	K	E	T	G	T	D	E	Q	A	M	R	L	T	L	R	Q	A	A	Q	Q	G	I	I	T	A	I	V	K	D	R	.	.	.	.	.	Y	Y	R	N	D	R	I	V	E	F	A	N	M	I	R	D	L	D	Q	E	C	G	S	T	C	A	A	D	F	R	D	R	L	G	V	G
Template Known Secondary structure										T	T																T	T	S						T	T		.	.	.	.	.																						S	S											T	S
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.						.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions