 |
| Job Description | P31061 | | Confidence | 27.88% | Date | Thu Jan 5 11:46:57 GMT 2012 |
| Rank | 368 | Aligned Residues | 24 |
| % Identity | 17% | Template | c1iufA_ |
| PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:centromere abp1 protein; |
PDBTitle: low resolution solution structure of the two dna-binding2 domains in schizosaccharomyces pombe abp1 protein
|
| Resolution | UNK |
|
| | |
2 | . | . | . | . | . | . | . | 10 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | | | | | | . | . | . | . | . | . |
|
|
| | | | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
E | V | N | K | K | Q | L | A | D | I | F | . |
. |
. |
. |
. |
. |
G | A | S | I | R | T | I | Q | N | W | Q | E | Q |
| Query Conservation | |
|
|
|
| |
|
|
| |
|
| . | . | . | . | . | . |
|
|
| |
|
|
| | |
| | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
| | |
|
| | |
| | | |
| | | |
| | |
|
|
|
| |
|
|
| |
| Template Sequence | |
R | S | G | Q | Q | D | L | I | E | W | F | R | E | K | F | G | K | D | I | S | Q | P | S | V | S | Q | I | L | S | S |
| Template Known Secondary structure | |
|
|
| | | | | | | | | | | | | S | S |
|
| S | S | S | S | T | T | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | | | | | |
|
|
|
|
| | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
