Job Description P31061 Confidence 89.03% Date Thu Jan 5 11:46:57 GMT 2012 Rank 34 Aligned Residues 51 % Identity 16% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.											.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		E	V	N	K	K	Q	L	A	D	I	F	G	A	S	I	R	T	I	Q	N	W	Q	E	Q	.	.	.	.	.	.	.	.	.	.	G	M	P	V	L	R	G	G	G	K	G	N	E	V	L	Y	D	S	A	A	.	.	V	I	R	W	Y	A	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		D	L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P	Y	D	K	L	E	G	L	L	I	A	W	F	Q	Q
Template Known Secondary structure		T	S										T												T												G	G	G	G	G	T								T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions