Return to main results Retrieve Phyre Job Id

Job DescriptionP32680
Confidence22.86%DateThu Jan 5 11:50:06 GMT 2012
Rank7Aligned Residues76
% Identity14%Templated1szia_
SCOP infoFour-helical up-and-down bundle Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140.... .....150.........160.........170.
Predicted Secondary structure 









.





Query SS confidence 

















































.


























Query Sequence  DACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEEL. KENPAVEQEWDIQWEIFRLLAECEERD
Query Conservation 

  

   
   
     
 
  

 

  

   

   
 
  
  
.  




 
   
  

  
       
Alig confidence 











.




































.


























Template Conservation    
  
   


.

   

           
   
  
 

 

    
 


  
  
   

 




  



 
Template Sequence  SMCVALGASIQG. LPSHVREQAQQARSQVNDLQATFSGIHSFQDLSAGVLAQTRERIARAREALDNTVEYVAQNTPAM
Template Known Secondary structure  TTTT.S
GGG

SGGG

T


TT
Template Predicted Secondary structure 

.











Template SS confidence 













































































   343......350.... .....360.........370.........380.........390.........400.........410.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions