Return to main results Retrieve Phyre Job Id

Job DescriptionP32680
Confidence6.59%DateThu Jan 5 11:50:06 GMT 2012
Rank29Aligned Residues46
% Identity13%Templated1or7a1
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.
Predicted Secondary structure 







Query SS confidence 















































Query Sequence  NPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRI
Query Conservation       

  
  


 

 


 


 


 

 
   


    
  
Alig confidence 


























..


















Template Conservation    
  

  
    
 
  
    
 
..  


  

 
  

   
Template Sequence  QIVFRTIESLPEDLRMAITLRELDGLS. . YEEIAAIMDCPVGTVRSRI
Template Known Secondary structure  S
TT


..TTS
Template Predicted Secondary structure 





..


Template SS confidence 















































   129130.........140.........150..... ....160.........170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions