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Job DescriptionP76387
Confidence99.75%DateThu Jan 5 12:22:28 GMT 2012
Rank27Aligned Residues179
% Identity21%Templatec3zq6D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative arsenical pump-driving atpase; PDBTitle: adp-alf4 complex of m. therm. trc40
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   523......530.........540.........550.........560.........570.........580........ .590........
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Query Sequence  QAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIG. . . . QGDITTAAKP
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Template Sequence  NKGKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP. AHSLSDSLEREIGHTPTKITENLYAVEIDPEVAMEE
Template Known Secondary structure  BTTB
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   10.........20.........30.........40.........50.. .......60.........70.........80........
 
   599600 .........610.........620.........630.........640.........650.........
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Query Sequence  TS. . IAKFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHV. . . . . . . . . . . . . . . . .
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Template Sequence  YQAKLMLQDQMDMASMSPGIDEAAAFDQFLRYMT. . TDEYDIVIFDTAPTGHTLRLLSFPEIMDSWVGKMIKIRRQIGSM
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   8990.........100.........110.........120.. .......130.........140.........150.........160......
 
   660.........670.........680.........690......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILN
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Template Sequence  AKAFKNILPFMGDEEEEDRALQDMEATKKQINAAREVMSDPERTSFKMVVIPEEMSIYESERAMKALEKYSIHADGVIVN
Template Known Secondary structure  TTTT

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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   697..700....
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Query Sequence  SIFRRASA
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Template Sequence  QVLPEESD
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   260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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