Return to main results Retrieve Phyre Job Id

Job DescriptionP76387
Confidence85.85%DateThu Jan 5 12:22:28 GMT 2012
Rank337Aligned Residues57
% Identity19%Templatec3uagA_
PDB info PDB header:ligaseChain: A: PDB Molecule:protein (udp-n-acetylmuramoyl-l-alanine:d- PDBTitle: udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   502.......510.. .......520.........530.........540.........550.........560.
Predicted Secondary structure 


....


















Query SS confidence 










. . . .
















































Query Sequence  PTDLAIEAIRS. . . . LRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLI
Query Conservation    
   
  
 ....
   
           
 


    



  
  

   
  
 




Alig confidence 










....





















...























Template Conservation     
 
  
      
 
  

         
 



... 





 

  

   
      
Template Sequence  LAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGS. . . NGKSTVTTLVGEMAKAAGVNVGVG
Template Known Secondary structure  TTSTT



S

S...S
TT

Template Predicted Secondary structure 













...






Template SS confidence 































































   76...80.........90.........100.........110.. .......120.........130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions