Job Description P76387 Confidence 86.97% Date Thu Jan 5 12:22:28 GMT 2012 Rank 308 Aligned Residues 180 % Identity 9% Template c3na7A_ PDB info PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874 Resolution 2.20 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	M	I	N	Q	L	Q	N	S	L	T	V	T	E	N	G	K	D	A	G	V	L	S	L	T	Y	T	G	E	D	R	E	Q	I	R	D	I	L	N	S	I	A	R	N	Y	Q	E	Q	N	I	E	R	K	S	A	E	A	S	K	S	L	A	F	L	A	Q	Q	L	P	E	V	R	S	R	L	D	V	A	E
Query Conservation
Alig confidence									.																																			.	.	.	.	.	.	.	.	.
Template Conservation									.																																			.	.	.	.	.	.	.	.	.
Template Sequence		N	T	H	L	K	Q	L	.	I	E	I	S	H	L	D	K	E	I	D	S	L	E	P	L	I	R	E	K	R	K	D	L	D	K	A	L	N	D	K	E	A	K	.	.	.	.	.	.	.	.	.	N	K	A	I	L	N	L	E	E	E	K	L	A	L	K	L	Q	V	S	K	N	E	Q	T	L	Q	D	T	N
Template Known Secondary structure									.													T																						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		N	K	L	N	A	F	R	Q	D	K	D	S	V	D	L	P	L	E	A	K	A	V	L	D	S	M	V	N	I	D	A	Q	L	N	E	L	T	F	K	E	A	E	I	S	K	L	Y	T	K	V	H	P	A	Y	R	T	L	L	E	K	R	Q	A	L	E	D	E	K	A	K	L	N	G	R	V	T	A	.	M	P
Query Conservation																																																																															.
Alig confidence																																																																															.
Template Conservation
Template Sequence		A	K	I	A	S	I	Q	K	K	M	S	E	I	K	S	E	R	E	L	R	S	L	N	I	E	E	D	I	A	K	E	R	S	N	Q	A	N	R	E	I	E	N	L	Q	N	E	I	K	R	K	S	E	K	Q	E	D	L	K	K	E	M	L	E	L	E	K	L	A	L	E	L	E	S	L	V	E	N	E	V	K
Template Known Secondary structure															S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	T	Q	Q	E	I	V	R	L	T	R	D	V	E	S	G	Q	Q	V	Y	M	.	Q	L	L	N	K	E	Q	E	L	K
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		N	I	K	E	T	Q	Q	I	I	F	K	K	K	E	D	L	V	E	K	T	E	P	K	I	Y	S	F	Y	E	R	I	R
Template Known Secondary structure																				T	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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