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Job DescriptionP76387
Confidence99.89%DateThu Jan 5 12:22:28 GMT 2012
Rank6Aligned Residues236
% Identity14%Templatec3ez6B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:plasmid partition protein a; PDBTitle: structure of para-adp complex:tetragonal form
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   467..470.........480.........490.........500.........510.........520. ........530.........540...
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Query Sequence  YASIPLSEWQKARDSVKTIKGIKRYKQSQLLAVGNPTDLAIEAIRSLRTSLHFAM. . . MQAQNNVLMMTGVSPSIGKTFV
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Template Sequence  LAKLPLLTRANVDYAVSEMEEKGYVFDKRPAGSSMKYAMSIQNIIDIYEHRGVPKYRDRYSEAYVIFISNLKGGVSKTVS
Template Known Secondary structure  GGGSTT

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   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   544.....550.. .......560.........570.........580. ........590.........600........
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Query Sequence  CANLAAVIS. . . . . . QTNKRVLLIDCDMRKGYTHELLGTNNVNG. . . . . . . . . LSEILIGQGDITTAAKPTSIAKFDLIP
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Template Sequence  TVSLAHAMRAHPHLLMEDLRILVIDLDP. QSSATMFLSHKHSIGIVNATSAQAMLQNVSREELLEEFIVPSVVPGVDVMP
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TTTGGG




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   126...130.........140.........150... ......160.........170.........180.........190.........200....
 
   609610 .........620.........630.........640.........650.........660.........670.....
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Query Sequence  RG. . . . . . . . . . . . . QVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKE
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Template Sequence  ASIDDAFIASDWRELCNEHLPGQNIHAVLKENVIDKLKSDYDFILVDSGPHLDAF. LKNALASANILFTPLPPATVDFHS
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   205....210.........220.........230.........240.........250......... 260.........270.........280...
 
   676...680..... ....690.........700....
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Query Sequence  VETSLSRFEQ. . . . . . . . . NGIPVKGVILNSIFRRASA
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Template Sequence  SLKYVARLPELVKLISDEGCECQLATNIGFMSKLSNKA
Template Known Secondary structure  TTTS







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   284.....290.........300.........310.........320.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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