Job Description P76387 Confidence 99.36% Date Thu Jan 5 12:22:28 GMT 2012 Rank 48 Aligned Residues 149 % Identity 21% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	M	M	Q	A	Q	N	N	V	L	M	M	T	G	V	S	P	S	I	G	K	T	F	V	C	A	N	L	A	A	V	I	S	Q	T	N	K	R	V	L	L	I	D	C	D	M	R	K	G	Y	T	H	E	L	L	G	T	N	N	V	N	G	L	S	E	I	L	I	G	Q	G	D	I	T	T	A	A	K	P
Query Conservation
Alig confidence																		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	.	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	W
Template Known Secondary structure						S	S	S										.	T	T	S																T	T											S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																						.	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.		.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.			.	.	.	.												.	660	.	.	.	.
Predicted Secondary structure																																							.																				.	.					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																				.	.					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	I	A	K	F	D	L	I	P	R	G	Q	V	P	P	N	P	S	E	L	L	M	S	E	R	F	A	E	L	V	N	W	A	S	K	N	.	Y	D	L	V	L	I	D	T	P	P	I	L	A	V	T	D	A	A	I	.	.	V	G	R	H	.	.	.	.	.	.	.	.	.	.	.	V	G	T	T	L	M
Query Conservation																																							.																				.	.					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.														.																				.	.					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	.	.	.	.	.	.	.	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L
Template Known Secondary structure						T													.	.	.	.	.	.	.													T	T		S										S	S																		T	T	S	T	T			S
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	R	Y	A	V	N	T	L	K	E	V	E	T	S	L	S	R	F	E	Q	N	G	I	P	V	K	G	V	I	L	N	S	I	F
Query Conservation
Alig confidence							.																		.	.
Template Conservation							.																		.	.
Template Sequence		V	L	D	G	N	.	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	.	.	I	T	G	L	I	L	T	K	L	D
Template Known Secondary structure					G	G	.	G	G	G	G	G											T		.	.										S
Template Predicted Secondary structure							.																		.	.
Template SS confidence
		290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions