Return to main results Retrieve Phyre Job Id

Job DescriptionP76387
Confidence99.83%DateThu Jan 5 12:22:28 GMT 2012
Rank15Aligned Residues192
% Identity20%Templatec2ozeA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:orf delta'; PDBTitle: the crystal structure of delta protein of psm19035 from2 streptoccocus pyogenes
Resolution1.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   508.510.........520.........530.........540.........550.........560.........570.........580. ..
Predicted Secondary structure 

































....
Query SS confidence 









































































. . . .

Query Sequence  EAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNG. . . . LS
Query Conservation 
  
 
   
           
 


    



  
  

   
  
 





 
 
   
          
....
 
Alig confidence 









































































....

Template Conservation                      

 
   







 
  

  

  
  




 
                     
 
Template Sequence  EELKILEELRRILSNKNEAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLTKDLAKTFKVELPRVNFY
Template Known Secondary structure 
S


SSSSSSTT


TT
TTTS




SS
Template Predicted Secondary structure 

































Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   584.....590.........600.........610.........620. ........630.........640.........650......
Predicted Secondary structure 




















.......










Query SS confidence 





































. . . . . . .


































Query Sequence  EILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLM. . . . . . . SERFAELVNWASKNYDLVLIDTPPILAVTDAAIVG
Query Conservation    
         
       
 

  
        

 .......       
  

  

 



 

     
   
 
Alig confidence 
















..


















.......

























.







Template Conservation                   ..                                 
       
 



     .      
 
Template Sequence  EGLKNGNLASSIVHLTD. . NLDLIPGTFDLMLLPKLTRSWTFENESRLLATLLAPLKSDYDLIIIDTVPTP. SVYTNNAI
Template Known Secondary structure  T

GGG
SSS..S


GGGGGTTTS
TGGGGGG
S
SS
.S
Template Predicted Secondary structure 








..






























.
Template SS confidence 















































































   98.100.........110.... .....120.........130.........140.........150.........160...... ...170....
 
   657..660.........670.........680..... ....690.........700..
Predicted Secondary structure 







......









Query SS confidence 




























. . . . . .
















Query Sequence  RHVGTTLMVARYAVNTLKEVETSLSRFEQ. . . . . . NGIPVKGVILNSIFRRA
Query Conservation     
  



    
       
   
  ......      
 


 
    
Alig confidence 




























......
















Template Conservation    

 



      
          
               

        
Template Sequence  VASDYVMIPLQAEEESTNNIQNYISYLIDLQEQFNPGLDMIGFVPYLVDTDS
Template Known Secondary structure 
S
GGG


TT
S
TT
Template Predicted Secondary structure 
















Template SS confidence 



















































   175....180.........190.........200.........210.........220......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions