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Job DescriptionP76387
Confidence99.33%DateThu Jan 5 12:22:28 GMT 2012
Rank50Aligned Residues164
% Identity20%Templatec2j7pA_
PDB info PDB header:signal recognitionChain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   505....510.........520.........530.........540.........550.........560.........570.........580....
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Query Sequence  LAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSE
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Template Sequence  TVYEALKEALGGEARLPVLKDRNLWFLVGLQ. GSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQL. . . . . . . . . .
Template Known Secondary structure  TTSS






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   77..80.........90.........100....... ..110.........120.........130.........140.....
 
   585....590.........600.........610.........620.........630.... .....640.........650..... .
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Query Sequence  ILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSERFAELVNWASK. NYDLVLIDTPPILAVTDAAIV. . . . . . . G
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Template Sequence  . . . . . . . . . . . RLLGEKVGVPVLEVMD. GESPESI. . . . . RRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEV
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   146...150.........160. ....... .170.........180.........190.........200........
 
   657..660.........670.........680.........690.........
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Query Sequence  RHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIF
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Template Sequence  LGPDEVLLVLDAMTGQ. EALSVARAFDEKVG. . VTGLVLTKLD
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   209210.........220.... .....230........ .240........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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