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Job DescriptionP76387
Confidence96.46%DateThu Jan 5 12:22:28 GMT 2012
Rank92Aligned Residues167
% Identity11%Templatec2j69D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:bacterial dynamin-like protein; PDBTitle: bacterial dynamin-like protein bdlp
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   506...510.........520.........530.........540.........550.........560.........570.........580.....
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Query Sequence  AIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEI
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Template Sequence  LERDIEDITIASKNLQQG. . . VFRLLVLGDMKRGKSTFLNALI. . . . . . GENLLPSDVNPCTAVLTV. . . . . . . . . . . . .
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   51........60........ .70.........80.........90 .........100........
 
   586...590.........600.........610.........620.........630..... ....640
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Query Sequence  LIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSERFAELVNWASKN. . . . . . . . . . . . . . . . . . . . . . . . . YDLVL
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Template Sequence  . . . . . . . . . . LRYGPEKKVTIHFNDGKSPQQLDFQNFKYKYTIDPAEAKKLEQEKKQAFPDVDYAVVEYPLTLLQKGIEI
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   109110.........120.........130.........140.........150.........160.........170........
 
   641........650.. .......660.........670.........680.........690.........700....
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Query Sequence  IDTPPILAVTDA. . . . AIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRASA
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Template Sequence  VDSPGLNDTEARNELSLGYVNNCHAILFVMRASQPCTLGERRYLENYIKGRGLTVFFLVNAWDQVRES
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   179180.........190.........200.........210.........220.........230.........240......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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