Job Description P76387 Confidence 96.62% Date Thu Jan 5 12:22:28 GMT 2012 Rank 88 Aligned Residues 153 % Identity 12% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	N	V	L	M	M	T	G	V	S	P	S	I	G	K	T	F	V	C	A	N	L	A	A	V	I	S	Q	T	N	K	R	V	L	L	I	D	C	D	M	R	K	G	Y	T	H	E	L	L	G	T	N	N	V	N	G	L	S	E	I	L	I	G	Q	G	D	I	T	T	A	A	K	P	T	S	I	A	K	F
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		F	K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I	L	F	A	Y	E	E	S	R	A	Q	L	L	R	N	A	Y	.	.	.	.	.	.	.	.	.	.	.	S	W	G	M	D	F	E	E	M	E	R	Q	N	L	.	.	.	L
Template Known Secondary structure			S	S									T	T	S	S														T	T	T								S	S	S											.	.	.	.	.	.	.	.	.	.	.	T	T	S									T	T	S	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.												330	.	.	.	.	.	.	.	.	.	340	.	.	.				.
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.		.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		D	L	I	P	R	G	Q	V	P	P	N	P	S	E	L	L	M	S	E	R	F	A	E	L	V	N	W	A	S	K	.	N	Y	D	L	V	L	I	D	T	P	P	I	L	A	V	T	D	A	A	I	V	G	R	H	V	G	T	T	L	M	V	A	R	Y	A	V	N	T	L	K	E	V	E	T	S	L	S	R	F
Query Conservation																																.
Alig confidence																	.	.	.	.	.											.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	C	A	Y	P	E	S	A	G	L	E	D	H	.	.	.	.	.	L	Q	I	I	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	N	N	A	F	R	Q	F	V	I	G	V	T	G	Y	A
Template Known Secondary structure								G	G	G	S						.	.	.	.	.										T	T			S											T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.						360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	N	G	I	P	V	K	G	V	I	L	N	S	I	F	R	R	A	S	A	Y	Q	D	Y	G	Y	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	E	E	I	T	G	L	F	T	N	T	S	D	Q	F	M	G	A	H	S	I	T	D	S	H	I	I	T
Template Known Secondary structure				T	T										S	S	S	S				S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions