 |
Job Description | P76387 | Confidence | 88.59% | Date | Thu Jan 5 12:22:28 GMT 2012 |
Rank | 266 | Aligned Residues | 66 |
% Identity | 15% | Template | c1skqB_ |
PDB info |
PDB header:translation | Chain: B: PDB Molecule:elongation factor 1-alpha; |
PDBTitle: the crystal structure of sulfolobus solfataricus elongation2 factor 1-alpha in complex with magnesium and gdp
|
Resolution | 1.80 Å |
|
 |
  |   |
634 | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | |
. | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | N | Y | D | L | V | L | I | D | T | P | P | I | L | A | . |
V | T | D | A | A | I | V | G | R | H | V | G | T | T | L | M | V | A | R | Y | A | V | N | . |
. |
. |
. |
. |
. |
. |
T | L | K | E | V | E | T | S | L | S | R | F | E | Q | N | G | I | P | V | K | G | V | I | L | N | S | I | F |
Query Conservation |   |
  |   |
|
|   |
|
|
|
|   |
|
|   |   |   | . |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |
| . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |
|
Template Sequence |   |
K | K | Y | F | F | T | I | I | D | A | P | G | H | R | D | F | V | K | N | M | I | T | G | A | S | Q | A | D | A | A | I | L | V | V | S | A | K | K | G | E | Y | E | A | G | M | S | V | E | G | Q | T | R | E | H | I | I | L | A | K | T | M | G | L | D | Q | L | I | V | A | V | N | K | M | D |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |
| T | T | S | T | T |  |  |  |  |  |  |  | S | S | S |
|
| S |  |  |  |  |  |  |  |
| S | T | T |  |  |  |  |  | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |
| G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|