Return to main results Retrieve Phyre Job Id

Job DescriptionP39393
Confidence99.45%DateThu Jan 5 12:00:28 GMT 2012
Rank2Aligned Residues84
% Identity15%Templated2p6ra4
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   606...610.........620.........630.........640.........650...... ...660.........670........
Predicted Secondary structure 



















.......













Query SS confidence 


















































. . . . . . .





















Query Sequence  TAEHSAQQSSERLQSYEKMFKNGQLNVLNCSTTMEMGVDTDRVMTLASRSQ. . . . . . . QATIPGPEWHLNDELVVRSLGY
Query Conservation 
 





    

  
  

 
 














   

 



 
.......




 





          
Alig confidence 






































...








.......











..........
Template Conservation 
   
  
    
      
  
   


 
     


...
    


           
 
     
..........
Template Sequence  AAFHHAGLLNGQRRVVEDAFRRGNIKVVVATPTLAAGVN. . . LPARRVIVRSLYRFDGYSKRIKVSEYKQ. . . . . . . . . .
Template Known Secondary structure 


TTS
TTS


STTTSSS
...

BS

SSSS

..........
Template Predicted Secondary structure 













...















..........
Template SS confidence 















































































   299300.........310.........320.........330....... ..340.........350.........360.....
 
   679680.........690......... 700.........710....
Predicted Secondary structure 

















.







Query SS confidence 




















.














Query Sequence  KTVELNEFILPAKATNAVERV. KDIQIHKQLNGPLSQ
Query Conservation              







 .               
Alig confidence  ............








.














Template Conservation  ............
 




 
    
  
 
      
Template Sequence  . . . . . . . . . . . . MAGRAGRPGMDERGEAIIIVGKRDR
Template Known Secondary structure  ............TTBS
TTT
S


GGG
Template Predicted Secondary structure  ............










Template SS confidence 




































   366...370.........380.........390
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions