Job Description P39393 Confidence 98.96% Date Thu Jan 5 12:00:28 GMT 2012 Rank 29 Aligned Residues 75 % Identity 11% Template c3tmiA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase ddx58; PDBTitle: structural basis for rna recognition and activation of rig-i Resolution 2.90 Å

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		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	E	H	S	A	Q	Q	S	S	E	R	L	Q	S	Y	E	K	M	F	K	N	G	Q	L	N	V	L	N	C	S	T	T	M	E	M	G	V	D	T	D	R	V	M	T	L	A	S	R	S	Q	Q	A	T	I	P	G	P	E	W	H	L	N	D	E	L	V	V	R	S	L	G	Y	K	T	V	E	L	N	E
Query Conservation
Alig confidence																									.																.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	N	Q	N	T	G	M	T	L	P	A	Q	K	C	I	L	D	A	F	K	A	D	.	H	N	I	L	I	A	T	S	V	A	D	E	G	I	D	.	.	.	I	A	Q	C	N	L	V	I	L	Y	E	Y	V	G	N	V	I	K	M	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S	S														T	S				.		S										S				.	.	.					S						S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.		.	690	.	.	.	.	.	.	.	.	.	700	.	.	.				.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	L	P	A	K	A	T	N	A	V	E	R	V	K	D	I	Q	I	H	K
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	T	R	G	R	G	R	A	R	G	S	K	C	F	L	L	T
Template Known Secondary structure		.	.	.	.	.		T	T	S	S		S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							727	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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