Job Description P39393 Confidence 99.17% Date Thu Jan 5 12:00:28 GMT 2012 Rank 11 Aligned Residues 75 % Identity 17% Template c3l9oA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome Resolution 3.39 Å

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		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.										660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.
Query Sequence		H	S	A	Q	Q	S	S	E	R	L	Q	S	Y	E	K	M	F	K	N	G	Q	L	N	V	L	N	C	S	T	T	M	E	M	G	V	D	T	D	R	V	M	T	L	A	S	R	S	Q	Q	A	T	.	.	.	.	.	.	.	.	.	I	P	G	P	E	W	H	L	N	D	E	L	V	V	R	S	L	G	Y	K
Query Conservation																																																					.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.			.	.	.								.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.			.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	H	S	G	L	L	P	I	L	K	E	V	I	E	I	L	F	Q	E	G	F	L	K	V	L	F	A	T	E	T	F	S	I	G	L	N	.	.	.	M	K	.	.	.	T	V	V	F	T	S	V	R	K	W	D	G	Q	Q	F	R	W	V	S	G	G	E	Y	I	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S		S															T									S				S				.	.	.			.	.	.					S		S				S	S	S													.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.			.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510				.	.				.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700		.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	V	E	L	N	E	F	I	L	P	A	K	A	T	N	A	V	E	R	V	K	.	D	I	Q	I	H	K	Q	L	N	G	P
Query Conservation																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	M	S	G	R	A	G	R	R	G	L	D	D	R	G	I	V	I	M	M	I	D	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.					S			S	S	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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