Job Description P39393 Confidence 96.03% Date Thu Jan 5 12:00:28 GMT 2012 Rank 77 Aligned Residues 80 % Identity 14% Template c3dmqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rna polymerase-associated protein rapa; PDBTitle: crystal structure of rapa, a swi2/snf2 protein that2 recycles rna polymerase during transcription Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.			630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		F	Y	Y	R	T	A	E	H	S	A	Q	Q	S	S	E	R	L	Q	S	Y	E	K	M	F	K	N	G	Q	.	.	L	N	V	L	N	C	S	T	T	M	E	M	G	V	D	T	D	R	V	M	T	L	A	S	R	S	Q	Q	A	T	I	P	G	P	E	W	H	L	N	D	E	L	V	V	R	S	L	G	Y	K
Query Conservation																														.	.
Alig confidence																														.	.																.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	I	R	A	A	V	F	H	E	G	X	S	I	I	E	R	D	R	A	A	A	W	F	A	E	E	D	T	G	A	Q	V	L	L	C	S	E	I	G	S	E	G	R	N	.	.	.	F	Q	F	A	S	H	X	V	X	F	D	L	P	F	N	P	D	L	L	E	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T									T	T	S		T	T											S	T	T	S	S							S			T	T		S	S		.	.	.		T	T							S	S			S	S							.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.				.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	E	L	N	E	F	I	L	P	A	K	A	T	N	A	V	E	R	V	K	D	I	Q	I	H	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	R	I	G	R	L	D	R	I	G	Q	A	H	D	I	Q	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.				T	T	S		S	S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions