Job Description P39393 Confidence 94.61% Date Thu Jan 5 12:00:28 GMT 2012 Rank 79 Aligned Residues 73 % Identity 15% Template c3dl8B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.										.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		H	S	A	Q	Q	S	S	E	R	L	Q	S	Y	E	K	M	F	K	N	G	Q	L	N	V	L	N	C	S	T	T	M	E	M	G	V	D	T	D	R	V	.	.	.	.	.	.	.	.	.	M	T	L	A	S	R	S	Q	Q	A	T	I	P	G	P	E	W	H	L	N	D	E	L	V	V	R	S	L	G	Y	K
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence																						.	.															.	.	.		.	.	.	.	.	.	.	.	.				.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.															.	.	.														.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	A	K	N	H	E	R	E	A	Q	I	I	E	E	A	G	Q	K	G	.	.	A	V	T	I	A	T	N	M	A	G	R	G	T	D	.	.	.	I	K	L	G	E	G	V	K	E	L	G	G	L	.	A	V	V	G	T	E	R	H	E	S	R	R	I	D	N	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S	S												S	S	S	S	S	.	.							T	T	T	S	S				.	.	.					S	S	G	G	G	S	S	S		.					S	S			S	S							.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.															.	.	.														.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.	.	.	.	.	.	.	490	.	.				.	.	.	.	.	.	.	500	.	.	.	.	.		.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	E	L	N	E	F	I	L	P	A	K	A	T	N	A	V	E	R	V	K	D	I	Q	I	H	K	Q	L	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	R	G	R	S	G	R	Q	G	D	P	G	I	T	Q	F	Y	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.				T	S		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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