 |
Job Description | P39393 | Confidence | 97.46% | Date | Thu Jan 5 12:00:28 GMT 2012 |
Rank | 70 | Aligned Residues | 70 |
% Identity | 13% | Template | c2w74B_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:type i restriction enzyme ecor124ii r protein; |
PDBTitle: mutant (k220r) of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
|
Resolution | 2.74 Å |
|
 |
  |   |
615 | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | R | L | Q | S | Y | E | K | M | F | K | N | G | Q | L | N | V | L | N | C | S | T | T | M | E | M | G | V | D | T | D | R | V | M | T | L | A | S | R | S | Q | Q | A | T | I | P | G | P | E | W | H | L | N | D | E | L | V | V | R | S | L | G | Y | K | T | V | E | L | N | E | F | I | L | P | A | K | A | T | N |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|
|
|   |
|   |   |
|   |
|
|
|
| . | . | . |   |
|   |
|   |   |
|   |   |
|   | . |
|
|   |   |   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
Template Sequence |   |
Q | N | Y | Y | R | D | L | A | Q | R | V | K | N | Q | D | I | D | L | L | I | V | V | G | M | F | L | T | G | F | D | . |
. |
. |
A | P | T | L | N | T | L | F | V | D | K | . |
N | L | R | Y | H | G | L | M | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | F | S | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  | S | S | T | T | S | S | S |
|
| . | . | . |
| T | T |  |  |  |  |  |  |
| S | . |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
635 | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | |
|
|
. | . | . | . | . | 670 | . | . | . | . | . | |
. | . | . | . | 680 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
695 | . | . | |
|
|
. | . | 700 | . | . | . | . | . | . | . | . | . | 710 |
Predicted Secondary structure |   |
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | E | . |
. |
. |
R | V | K | D | I | Q | I | H | K | Q | L | N | G |
Query Conservation |   |
|
|
| . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |
Template Sequence |   |
T | N | R | I | Y | D | A | T | K | T | F | G | N | I | V | T | F | R | D |
Template Known Secondary structure |   |
G |
|
|
|
|
| T | T |
|
| S |  |  |  |  |  | S | S |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
689 | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|