Job Description P39393 Confidence 98.89% Date Thu Jan 5 12:00:28 GMT 2012 Rank 33 Aligned Residues 76 % Identity 13% Template c2fzlA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad25, xpb; PDBTitle: structure of c-terminal domain of archaeoglobus fulgidus xpb Resolution 2.90 Å

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		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	A	Q	Q	S	S	E	R	L	Q	S	Y	E	K	M	F	K	N	G	Q	L	N	V	L	N	C	S	T	T	M	E	M	G	V	D	T	D	R	V	M	T	L	A	S	R	S	Q	Q	A	T	I	P	G	P	E	W	H	L	N	D	E	L	V	V	R	S	L	G	Y	K	T	V	E	L	N	E	F	I	L
Query Conservation
Alig confidence																																						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	H	R	T	S	R	E	E	R	E	E	I	L	E	G	F	R	T	G	R	F	R	A	I	V	S	S	Q	V	L	D	E	G	I	D	.	.	.	V	P	D	A	N	V	G	V	I	M	S	G	S	G	S	A	R	E	Y	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S	S		S											T	T	S	S		S					S	S		S	S	S	S			.	.	.												S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.				410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	K	A	T	N	A	V	E	R	V	K	D	I	Q	I	H	K	Q	L	N
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	R	L	G	R	I	L	R	P	S	K	G	K	K	E	A	V	L	Y	E
Template Known Secondary structure		.	.										S	S	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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