Job Description P39393 Confidence 98.87% Date Thu Jan 5 12:00:28 GMT 2012 Rank 35 Aligned Residues 111 % Identity 18% Template c2eyqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor Resolution 3.20 Å

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		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.		.	.	.	.	.	.	.	.	670
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		D	I	N	D	R	V	V	E	G	G	F	Y	Y	R	T	A	E	H	S	A	Q	Q	S	S	E	R	L	Q	S	Y	E	K	M	F	K	N	G	Q	L	N	V	L	N	C	S	T	T	M	E	M	G	V	D	T	D	R	V	M	T	L	A	S	R	S	Q	Q	A	T	I	P	.	G	P	E	W	H	L	N	D	E
Query Conservation																																																																								.
Alig confidence																																																							.	.	.															.								.	.
Template Conservation																																																							.	.	.																							.	.
Template Sequence		K	A	A	E	R	L	A	E	L	V	P	E	A	R	I	A	I	G	H	G	Q	M	R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N	V	L	V	C	T	T	I	I	E	T	G	I	D	.	.	.	I	P	T	A	N	T	I	I	I	E	R	A	D	H	F	G	L	A	Q	L	H	Q	.	.
Template Known Secondary structure												T	T	S							S	S															T	T	S							S	S	T	T	G	G	G	S		.	.	.		T	T							T	T	T	T	S	S								.	.
Template Predicted Secondary structure																																																							.	.	.																							.	.
Template SS confidence
		824	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.				.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.				.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		L	V	V	R	S	L	G	Y	K	T	V	E	L	N	E	F	I	L	P	A	K	A	T	N	A	V	E	R	V	K	D	I	Q	I	H	K	Q	L	.	.	.	N	G	P	L	S	Q	F	G	Q	R	F	W	D	V	L	F	N	D	H	E
Query Conservation																																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	R	V	G	R	S	H	H	Q	.	A	Y	A	W	L	L	T	P	H	P	K	A	M	T	T	D	A	Q	K	R	L	E	A	I	A	S	L	E	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			B	T	T	B		.										G	G	G	S												T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
																						899	900	.	.	.	.	.	.	.	.	.		910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions