Job Description P39393 Confidence 97.95% Date Thu Jan 5 12:00:28 GMT 2012 Rank 65 Aligned Residues 84 % Identity 5% Template c1ymfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:genome polyprotein [contains: flavivirin PDBTitle: crystal structure of yellow fever virus ns3 helicase2 complexed with adp Resolution 2.60 Å

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		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.						.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.																	.
Query SS confidence																																											.	.	.	.	.																	.
Query Sequence		Y	Y	R	T	A	E	H	S	A	Q	Q	S	S	E	R	L	Q	S	Y	E	K	M	F	K	N	G	Q	L	N	V	L	N	C	S	T	T	M	E	M	G	V	.	.	.	.	.	D	T	D	R	V	M	T	L	A	S	R	S	Q	Q	A	T	.	I	P	G	P	E	W	H	L	N	D	E	L	V	V	R	S	L
Query Conservation																																											.	.	.	.	.																	.
Alig confidence																																											.	.	.	.	.		.	.	.													.										.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		G	K	S	V	V	V	L	N	R	K	T	F	E	K	K	P	D	F	I	L	A	T	D	I	A	E	X	G	A	N	L	C	V	E	R	V	L	D	C	R	T	A	F	K	P	V	L	.	.	.	V	D	E	G	R	K	V	A	I	K	G	P	L	R	I	S	A	S	S	A	A	Q	.	.	.	.	.	.	.	.
Template Known Secondary structure		T								S	S	S						S					S	S	G	G	G			T	T				S														.	.	.		T	T	T	T																		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430				.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	K	T	V	E	L	N	E	F	I	L	P	A	K	A	T	N	A	V	E	R	V	K	D	I	Q	I	H	K	Q	L	N	G	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	R	I	G	R	N	P	N	R	D	G	D	S	Y	Y	Y	S	E	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	S			T	T										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions