Job Description P39393 Confidence 84.05% Date Thu Jan 5 12:00:28 GMT 2012 Rank 84 Aligned Residues 50 % Identity 12% Template c1cu1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein (protease/helicase ns3); PDBTitle: crystal structure of an enzyme complex from hepatitis c2 virus Resolution 2.50 Å

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		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.																						.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	Q	L	N	V	L	N	C	S	T	T	M	E	M	G	V	D	T	D	R	V	M	T	L	A	S	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	A	T	I	P	G	P	E	W	H	L	N	D	E	L	V	V	R	S	L	G	Y	K	T	V	E	L	N	E
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	G	D	V	V	V	V	A	T	D	A	L	M	T	G	Y	T	.	.	.	G	.	D	F	D	S	V	I	D	C	N	T	C	V	T	Q	T	V	D	F	S	L	D	P	T	F	T	I	E	T	T	T	V	P	Q	D	A	V	S	R	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	S							T	T							.	.	.		.			S																		S	S	S											B							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1402	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.				1420		.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	L	P	A	K	A	T	N	A	V	E	R	V	K	D	I
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	R	R	G	R	T	G	R	G	R	R	G	I
Template Known Secondary structure		.	.	.	.	.			T	T	S		S	S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							1461	.	.	.	.	.	.	.	.	1470	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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