Job Description P39393 Confidence 97.82% Date Thu Jan 5 12:00:28 GMT 2012 Rank 67 Aligned Residues 55 % Identity 11% Template c1a1vA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:protein (ns3 protein); PDBTitle: hepatitis c virus ns3 helicase domain complexed with single2 stranded sdna Resolution 2.20 Å

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		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.			650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		F	K	N	G	Q	L	N	V	L	N	C	S	T	T	M	E	M	G	V	D	T	D	R	V	M	.	.	T	L	A	S	R	S	Q	Q	A	T	I	P	G	P	E	W	H	L	N	D	E	L	V	V	R	S	L	G	Y	K	T	V	E	L	N	E	F	I	L	P	A	K	A	T	N	A	V	E	R	V	K	D	I
Query Conservation																											.	.
Alig confidence																						.	.	.			.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	T	G	D	F	D	S	V	I	D	C	N	T	V	T	Q	T	V	D	.	.	.	F	S	L	D	P	T	F	T	I	E	T	T	T	L	P	Q	D	A	V	S	R	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	R	T	G	R	G	K	P	G	I
Template Known Secondary structure							B	S														.	.	.				S	S	S											B							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	B		S	S	S
Template Predicted Secondary structure																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.				.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.																							.	.	.	460	.	.	.	.	.	.	.	.
		703	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		473	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions