Job Description P36566 Confidence 99.79% Date Thu Jan 5 11:53:21 GMT 2012 Rank 76 Aligned Residues 154 % Identity 14% Template c3opnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hemolysin; PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis Resolution 2.05 Å

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		33	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																									.
Query SS confidence												.	.																									.
Query Sequence		D	L	D	R	V	L	A	E	M	G	.	.	P	Q	K	L	R	V	L	D	A	G	G	G	E	G	Q	T	A	I	K	M	A	E	R	G	.	H	Q	V	I	L	C	D	L	S	A	Q	M	I	D	R	A	K	Q	A	A	E	A	K	G	V	S	D	N	M	Q	F	I	H	C	A	A	Q	D	V	A	S	H	L
Query Conservation												.	.																									.
Alig confidence												.	.																									.																																									.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		K	L	E	K	A	L	K	E	F	H	L	E	I	N	G	K	T	C	L	D	I	G	S	S	T	G	G	F	T	D	V	X	L	Q	N	G	A	K	L	V	Y	A	L	D	V	G	T	N	Q	L	A	W	K	I	R	S	D	E	R	V	V	V	X	E	Q	F	N	F	R	N	A	V	L	A	D	F	E	.	.	.
Template Known Secondary structure										T	T				T	T							T		T	T	S									T	T		S							S	S										T		T	T						S			G	G	G			G	G	G			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	P	V	D	L	I	L	F	H	A	V	L	E	W	V	A	D	P	R	S	V	L	Q	T	L	W	S	V	L	R	P	G	G	V	L	S	L	M	F	Y	N	A	H	G	L	L	M	H	N	M	V	A	G	N	F	D	Y	V	Q	A	G	M	P	K	K	K	K	R	T	L	S	P	D	Y	P	R	D	P	A
Query Conservation
Alig confidence																				.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	R	P	S	F	T	S	I	D	V	S	F	I	S	L	D	L	.	.	.	I	L	P	P	L	Y	E	I	L	E	K	N	G	E	V	A	A	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	Q	F	E	A	G	R	E	Q	V	G	N	G	I	I	R	D	P	K	V	H	Q	X	T	I	E
Template Known Secondary structure		S				S							S	S	S		G	G	G	.	.	.	T								S		T	T								.	.	.	.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																				.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.														.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	Y	L	W	L	E	E	A	G	W	Q	I	M	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	L	K	T	A	T	Q	L	G	F	S	V	K	G	L
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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