Job Description P36566 Confidence 99.84% Date Thu Jan 5 11:53:21 GMT 2012 Rank 60 Aligned Residues 159 % Identity 19% Template c3mq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methyltransferase; PDBTitle: crystal structure of 16s rrna methyltranferase kamb Resolution 1.69 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																										.	.	.
Query SS confidence																																	.	.																										.	.	.
Query Sequence		D	R	V	L	A	E	M	G	P	Q	K	L	R	V	L	D	A	G	G	G	E	G	Q	T	A	I	K	M	A	E	R	.	.	G	H	Q	V	I	L	C	D	L	S	A	Q	M	I	D	R	A	K	Q	A	A	E	A	K	G	.	.	.	V	S	D	N	M	Q	F	I	H	C	A	A	Q	D	V	A	S	H	L
Query Conservation																																	.	.																										.	.	.
Alig confidence																																	.	.																										.	.	.
Template Conservation
Template Sequence		A	E	F	E	Q	L	R	S	Q	Y	D	D	V	V	L	D	V	G	T	G	D	G	K	H	P	Y	K	V	A	R	Q	N	P	S	R	L	V	V	A	L	D	A	D	K	S	R	M	E	K	I	S	A	K	A	A	A	K	P	A	K	G	G	L	P	N	L	L	Y	L	W	A	T	A	E	R	L	P	P	L	S
Template Known Secondary structure									T	T	S	S							S		T	T												T	T								S		G	G	G	G								T	S		G	G	G	T			T	T								S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		E	T	.	.	.	P	V	D	L	I	L	F	H	A	V	L	E	W	V	A	D	P	R	S	V	L	Q	T	L	W	S	V	L	R	P	G	G	V	L	S	L	M	F	Y	N	A	H	G	L	L	M	H	N	M	V	A	G	N	F	D	Y	V	Q	A	G	M	P	K	K	K	K	R	T	L	S	P	D	Y	P	R
Query Conservation				.	.	.
Alig confidence				.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	E	L	H	V	L	M	P	W	G	S	L	L	R	G	V	L	G	S	S	P	E	M	L	R	G	M	A	A	V	C	R	P	G	A	S	F	L	V	A	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	A	W	R	P	S	V	P	E	V	G	E	H	P	E	P	T	P	D	S
Template Known Secondary structure										S											T	S	S	S									T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	B	T	T	B		G	G	G	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	Q	V	Y	L	W	L	E	E	A	G	W	Q	I	M	G	K	T	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	E	W	L	A	P	R	Y	A	E	A	G	W	K	L	A	D	C	R	Y	L
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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