Job Description P36566 Confidence 98.04% Date Thu Jan 5 11:53:21 GMT 2012 Rank 288 Aligned Residues 145 % Identity 15% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																								.														.	.																										.	.	.	.	.
Query SS confidence																								.														.	.																										.	.	.	.	.
Query Sequence		F	D	D	I	A	E	K	F	S	R	N	I	Y	G	T	T	K	G	Q	L	R	Q	.	A	I	L	W	Q	D	L	D	R	V	L	A	E	.	.	M	G	P	Q	K	L	R	V	L	D	A	G	G	G	E	G	Q	T	A	I	K	M	A	E	R	.	.	.	.	.	G	H	Q	V	I	L	C	D	L	S	A	Q
Query Conservation																								.														.	.																										.	.	.	.	.
Alig confidence												.												.														.	.																										.	.	.	.	.
Template Conservation												.
Template Sequence		Y	E	Y	L	I	G	Q	F	A	T	.	D	S	G	K	K	A	G	E	F	Y	T	P	Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S
Template Known Secondary structure												.	T	S				S	B																		T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S
Template Predicted Secondary structure												.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																								.	.	.	.	.	.	130	.
Predicted Secondary structure																			.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	D	R	A	K	Q	A	A	E	A	K	G	V	S	D	N	.	.	.	M	Q	F	I	H	C	A	A	Q	D	V	A	S	H	L	E	T	P	V	D	L	I	L	F	H	A	V	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	A	D	P	R	S	V
Query Conservation																			.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P	I	E	N	Q	F	L	H	N	A	D	T	L	D	E	D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F
Template Known Secondary structure													T	T			G	G	G						S		T	T	T	S		S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	Q	T	L	W	S	V	L	R	P	.	G	G	V	L	S	L	M	F	Y	N
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		L	L	H	G	Y	Y	H	L	K	Q	D	N	G	V	X	A	I	V	L	P	H
Template Known Secondary structure								T	B		T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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