Job Description P36566 Confidence 97.46% Date Thu Jan 5 11:53:21 GMT 2012 Rank 303 Aligned Residues 215 % Identity 14% Template c3ieiD_ PDB info PDB header:transferase Chain: D: PDB Molecule:leucine carboxyl methyltransferase 1; PDBTitle: crystal structure of human leucine carboxylmethyltransferase-1 in2 complex with s-adenosyl homocysteine Resolution 1.90 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	Q	A	I	L	W	Q	D	L	D	R	V	L	A	E	M	G	P	Q	K	L	R	V	L	D	A	G	G	G	E	G	Q	T	A	I	K	M	A	E	R	.	G	H	Q	V	I	L	C	D	L	S	A	Q	M	I	D	R	A	K	Q	A	A	E	A	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		A	R	V	H	G	V	S	Q	L	I	K	A	F	L	R	K	T	E	C	H	C	.	Q	I	V	N	L	G	A	G	M	D	T	T	F	W	R	L	K	D	E	D	L	L	S	S	K	Y	F	E	V	D	F	P	M	I	V	T	R	K	L	H	S	I	K	C	K	P	P	L	S	S	P	I	L	E	L	H	S	E
Template Known Secondary structure																		T	T	T		S	.						T		T	T										T	T				S																															T	S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
												91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.										.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	V	S	D	N	M	Q	F	I	H	C	A	A	Q	D	V	A	S	.	.	.	.	.	.	.	.	.	H	L	E	T	P	V	D	L	I	L	F	H	A	V	L	E	W	V	.	.	A	D	P	R	S	V	L	Q	T	L	W	S	V	L	R	P	G	G	V	L	S	L	M	F
Query Conservation		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		D	T	L	Q	M	D	G	H	I	L	D	S	K	R	Y	A	V	I	G	A	D	L	R	D	L	S	E	L	E	E	K	L	K	K	C	N	M	N	T	Q	L	P	T	L	L	I	A	E	C	V	L	V	Y	M	T	P	E	Q	S	A	N	L	L	K	W	A	A	N	S	F	E	R	A	M	F	I	N	Y	E	Q
Template Known Secondary structure		S	S		B			T	T					S	S								T	T												T	T			T	T	S								S		G	G	G	S																	S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		Y	N	A	H	G	L	L	M	H	N	M	V	A	G	N	F	D	Y	V	Q	A	G	M	P	K	K	K	K	R	T	L	S	P	D	Y	P	R	D	P	A	Q	V	Y	L	W	L	E	E	A	G	W	Q	I	M	G	K	T	G	V	R	V	F	H	D	Y	L	R	E	K	H	Q	Q	R	.	.	.	.	D	C	Y
Query Conservation																																																																											.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																																																				.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		V	N	M	G	D	R	F	G	Q	I	M	I	E	N	.	.	.	.	.	.	.	.	L	R	R	R	Q	C	D	L	A	G	V	E	T	C	K	S	L	E	S	Q	K	E	R	L	L	S	N	G	W	E	T	A	S	A	V	D	M	M	E	L	Y	N	R	L	P	R	A	E	V	S	R	I	E	S	L	E	F	L
Template Known Secondary structure			S	T	T	S										.	.	.	.	.	.	.	.				T	T				T	T	G	G	G	G	S											T	T	T		S													T	S											T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.									.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	L	E	L	E	T	R	Y	C	R	Q	E	P	Y	I	T	L	G	R	Y	I	H	V	T	A	R	K	P	Q	S
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		D	E	M	E	L	L	E	Q	L	M	.	.	.	.	.	.	.	.	.	R	H	Y	C	L	C	W	A	T	K	G	G	N
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	T	T									S		T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.										.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions