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Job DescriptionP36566
Confidence99.74%DateThu Jan 5 11:53:21 GMT 2012
Rank93Aligned Residues221
% Identity16%Templatec3giwA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:protein of unknown function duf574; PDBTitle: crystal structure of a duf574 family protein (sav_2177) from2 streptomyces avermitilis ma-4680 at 1.45 a resolution
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3.... ..10....... ..20.........30.........40.........50.... .....60..... ....70...
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Query Sequence  DRNFD. . . DIAEKFSRNI. YGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGG. . EGQTAIKMAER. . . GHQVILCD
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Template Sequence  KDYYPADKEAGDAXSREWPALPVHXRANRDWXNRAVAHLAKEAGIR. . QFLDIGTGIPTSPNLHEIAQSVAPESRVVYVD
Template Known Secondary structure  S



TTTS


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TT
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   34.....40.........50.........60.........70......... 80.........90.........100.........110.
 
   74.....80.........90.........100.. .......110.........120..... ....130.........140
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Query Sequence  LSAQMIDRAKQAAEAKGVSDNMQFIHCAA. . . . . . . . . . QDVASHLETPVDLILFHAVLEWV. . . ADPRSVLQTLWSVLR
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Template Sequence  NDPIVLTLSQGLLASTPE. GRTAYVEADXLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP
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SS.S

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S
GGGS
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   112.......120......... 130.........140.........150.........160.........170.........180.........190
 
   141........150.........160.........170.........180.........190.........200.........210.........220
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Query Sequence  PGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQ
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Template Sequence  SGSYLAXSIGTAEF. . . . . . . . . . APQEVGRVAREYAARNXPXRLRTHAEAEEFFE. . GLELVEP. GIVQVHKWHPDAAT
Template Known Secondary structure  TT


TT..........STT






TTT..TS
TT.
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   191........200.... .....210.........220.........230...... ...240... ......250.......
 
   221........230.........240.........250.....
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Query Sequence  QRDCYEALLELETRYCRQEPYITLGRYIHVTARKP
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Template Sequence  ADGI. . . . . . . . . . . . . . . . RDEDIAXYGAVARKP
Template Known Secondary structure  TTT
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GGG



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   258.260. ........270......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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