 |
Job Description | P36566 | Confidence | 89.55% | Date | Thu Jan 5 11:53:21 GMT 2012 |
Rank | 345 | Aligned Residues | 95 |
% Identity | 13% | Template | c3g7uA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:cytosine-specific methyltransferase; |
PDBTitle: crystal structure of putative dna modification methyltransferase2 encoded within prophage cp-933r (e.coli)
|
Resolution | 1.75 Å |
|
 |
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | V | L | D | A | G | G | G | E | G | Q | T | A | I | K | M | A | E | R | G | H | Q | V | I | . |
L | C | D | L | S | A | Q | M | I | D | R | A | K | Q | A | A | E | A | K | G | V | S | . |
D | N | M | Q | F | I | H | C | A | A | Q | D | V | A | S | H | L | E | T | P | V | D | L | I | L | F | H | A | V | L | E |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|   |   |
|   | . |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|
|
|   |
|
|   |   |   |
|
|   |   |
|
|   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|
Template Sequence |   |
L | N | V | I | D | L | F | S | G | V | G | G | L | S | L | G | A | A | R | A | G | F | D | V | K | M | A | V | E | I | D | Q | H | A | I | N | T | H | A | I | N | F | P | R | S | L | H | V | Q | E | D | V | S | L | L | N | A | E | I | I | K | G | F | F | K | N | D | M | P | I | D | G | I | I | G | G | P | P | C | Q |
Template Known Secondary structure |   |
|  |  |  |  |  | T |
| T | T | S |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |
|
|
| G | G | G |
|
|  |  |  |  |  |  |  |  |
| S |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
124 | . | |
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
 |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | V | . |
. |
A | D | P | R | S | V | L | Q | T | L | W | S | V | L | R |
Query Conservation |   |
  |   | . | . |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
Alig confidence |   |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
Template Sequence |   |
G | F | S | D | D | S | R | N | Q | L | Y | M | H | F | Y | R | L | V | S |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|