Return to main results Retrieve Phyre Job Id

Job DescriptionP36566
Confidence99.92%DateThu Jan 5 11:53:21 GMT 2012
Rank18Aligned Residues196
% Identity16%Templatec3dlcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative s-adenosyl-l-methionine-dependent PDBTitle: crystal structure of a putative s-adenosyl-l-methionine-dependent2 methyltransferase (mmp1179) from methanococcus maripaludis at 1.15 a3 resolution
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60..... ....70.........80
Predicted Secondary structure 


















.



Query SS confidence 































































.














Query Sequence  QDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAER. GHQVILCDLSAQMID
Query Conservation                       
          
   
        









     

  .
  
  

       
Alig confidence 






























....




























.














Template Conservation           
   
      
 
     
  .... 
       
 








  
  

      
 


 
   
 
Template Sequence  NKKKFDKKGAKNXDEISKTLFAPIYPIIAEN. . . . IINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHXNE
Template Known Secondary structure 


TTSTTTTT....


T
TTSSS
Template Predicted Secondary structure 
....
















Template SS confidence 















































































   4.....10.........20.........30.... .....40.........50.........60.........70.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  RAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM
Query Conservation                                   
 
     
         
    
 




 
 
             
Alig confidence 

























.




















































Template Conservation   
                        .      
 
               
  
   




 
 
             
Template Sequence  IALKNIADANLNDRIQIVQGDVHNIP. IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSI
Template Known Secondary structure  TT
TTT
BTTB
S.S
TT
S
GGG
S


SS
Template Predicted Secondary structure 















.





















Template SS confidence 















































































   80.........90.........100..... ....110.........120.........130.........140.........150........
 
   161........170.........180.........190.........200......
Predicted Secondary structure 






















Query SS confidence 













































Query Sequence  VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKT
Query Conservation                                    
  


      
Alig confidence  ....









































Template Conservation  ....                          
   
  


    
 
Template Sequence  . . . . SAEXIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII
Template Known Secondary structure  ....
TTSST
SS
Template Predicted Secondary structure  ....



















Template SS confidence 













































   159160.........170.........180.........190.........200
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions