Job Description P36566 Confidence 93.99% Date Thu Jan 5 11:53:21 GMT 2012 Rank 323 Aligned Residues 216 % Identity 10% Template c2zwaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine carboxyl methyltransferase 2; PDBTitle: crystal structure of trna wybutosine synthesizing enzyme2 tyw4 Resolution 1.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																					.																							.	.	.	.	.	.	.	.
Query SS confidence																					.																							.	.	.	.	.	.	.	.
Query Sequence		L	R	Q	A	I	L	W	Q	D	L	D	R	V	L	A	E	M	G	P	.	Q	K	L	R	V	L	D	A	G	G	G	E	G	Q	T	A	I	K	M	A	E	R	.	.	.	.	.	.	.	.	G	H	Q	V	I	L	C	D	L	S	A	Q	M	I	D	R	A	K	Q	A	A	E	A	K	G	V	S	D	N	M
Query Conservation																					.																							.	.	.	.	.	.	.	.
Alig confidence																					.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	L	F	A	I	R	S	R	L	N	S	I	I	E	Q	T	P	Q	D	K	K	I	V	V	V	N	L	G	C	G	Y	D	P	L	P	F	Q	L	L	D	T	N	N	I	Q	S	Q	Q	Y	H	D	R	V	S	F	I	D	I	D	Y	S	D	L	L	K	I	K	I	E	L	I	K	T	I	P	E	L	S	K
Template Known Secondary structure																		S		T	T	S								T		T	T										T	T		G	G	G	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		96	.	.																																			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		Q	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	C	A	A	Q	D	V	A	S	H	L	E	T	P	V	D	L	I	L	F	H	A	V	L	E	W	V	.	A	D	P	R	S	V	L	Q	T	L	W	S	V	L	R
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.															.
Template Conservation																																																																																	.
Template Sequence		I	I	G	L	S	E	D	K	D	Y	V	D	D	S	N	V	D	F	L	T	T	P	K	Y	L	A	R	P	C	D	L	N	D	S	K	M	F	S	T	L	L	N	E	C	Q	L	Y	D	P	N	V	V	K	V	F	V	A	E	V	S	L	A	Y	M	K	P	E	R	S	D	S	I	I	E	A	T	S	K	M	.
Template Known Secondary structure			T	T			S	S		S	S		S		T	T							S	S								T	T												T	T	T	T		T	T									S	S	G	G	G	S														T	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		141	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		P	G	G	V	L	S	L	M	F	.	.	.	Y	N	A	H	G	L	L	M	H	N	M	V	A	G	N	F	D	Y	V	Q	A	G	M	P	K	K	K	K	R	T	L	S	P	D	Y	P	R	D	P	A	Q	V	Y	L	W	L	E	E	A	G	W	Q	I	M	G	K	T	G	V	R	V	F	H	D	Y	L	R	E
Query Conservation											.	.	.
Alig confidence											.	.	.																								.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		E	N	S	H	F	I	I	L	E	Q	L	I	P	K	G	P	F	E	P	F	S	K	Q	M	L	A	H	F	K	R	N	D	S	P	L	.	.	.	.	.	.	.	Q	S	V	L	K	Y	N	T	I	E	S	Q	V	Q	R	F	N	K	L	G	F	A	Y	V	N	V	G	D	M	F	Q	L	W	E	S	A	D	E
Template Known Secondary structure		S	S											T	T		T	T	S													T	T				.	.	.	.	.	.	.		G	G	G	T			S											T	T																S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280								.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		218	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		K	H	Q	Q	R	.	.	.	.	D	C	Y	E	A	L	L	E	L	E	T	R	Y	C	R	Q	E	P	Y	I	T	L	G	R	Y	I	H	V	T	A	R	K	P	Q	S
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		A	T	K	K	E	L	L	K	V	E	P	F	D	E	L	E	E	F	H	L	F	C	.	.	.	.	.	.	.	.	.	H	H	Y	V	L	C	H	A	T	N	Y	K	E
Template Known Secondary structure											S													.	.	.	.	.	.	.	.	.		T								S		T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340										.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions