Job Description P36566 Confidence 99.77% Date Thu Jan 5 11:53:21 GMT 2012 Rank 86 Aligned Residues 213 % Identity 12% Template c2vdwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:vaccinia virus capping enzyme d1 subunit; PDBTitle: guanosine n7 methyl-transferase sub-complex (d1-d12) of the2 vaccinia virus mrna capping enzyme Resolution 2.70 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																											.																										.	.	.	.	.	.	.	.
Query SS confidence																											.																										.	.	.	.	.	.	.	.
Query Sequence		G	P	Q	K	L	R	V	L	D	A	G	G	G	E	G	Q	T	A	I	K	M	A	E	R	G	.	H	Q	V	I	L	C	D	L	S	A	Q	M	I	D	R	A	K	Q	A	A	E	A	K	G	V	.	.	.	.	.	.	.	.	S	D	N	M	Q	F	I	H	C	A	A	Q	D	V	A	S	H	L	E	T	P
Query Conservation																											.																										.	.	.	.	.	.	.	.
Alig confidence																											.																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	N	K	R	K	V	L	A	I	D	F	G	N	G	A	D	L	E	K	Y	F	Y	G	E	I	A	L	L	V	A	T	D	P	D	A	D	A	I	A	R	G	N	E	R	Y	N	K	L	N	S	K	Y	Y	K	F	D	Y	I	Q	E	T	I	R	S	D	T	F	V	S	S	V	R	E	V	F	Y	F	G	K
Template Known Secondary structure				S							T	T		T	T	T	T	T							T	T		S							S																													T	T	S	S	S							T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure															.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	L	I	L	F	H	A	V	L	E	W	V	.	.	.	A	D	P	R	S	V	L	Q	T	L	W	S	V	L	R	P	G	G	V	L	S	L	M	F	Y	N	A	H	G	L	L	M	H	N	M	V	A	G	N	F	D	Y	V	Q	A	G	M	P	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	I	I	D	W	Q	F	A	I	H	Y	S	F	H	P	R	H	Y	A	T	V	M	N	N	L	S	E	L	T	A	S	G	G	K	V	L	I	T	T	M	D	G	D	K	L	S	K	L	T	D	K	K	T	F	I	I	H	K	N	L	P	S	S	E	N	Y	M	S	V	E	K	I	A	D	D	R	I	V	V
Template Known Secondary structure									S		G	G	G	T		S	T	T	T																													T	T			S								S	S	S		T	T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
						176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.										.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.	.	.	.																																								.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																								.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	K	K	R	T	L	S	P	D	Y	P	R	D	P	A	Q	V	Y	L	W	L	E	E	A	G	W	Q	I	M	G	K	T	G	V	R	V	F	H	D	Y	.	.	.	.	.	.	.	.	.	L	R	E	K	H	Q	Q	R	D	C	Y	E	A	L	L	E	L	E	T	R	Y	C	R	Q	E	P	Y	I
Query Conservation		.	.	.	.																																								.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	P	S	T	M	S	T	P	M	T	E	Y	I	I	K	K	N	D	I	V	R	V	F	N	E	Y	G	F	V	L	V	D	N	V	D	F	A	T	I	I	E	R	S	K	K	F	I	N	G	A	S	T	M	E	D	R	P	S	T	R	N	F	F	E	L	N	R	G	A	I	K	C	E	G	L	D	V	E	D
Template Known Secondary structure		B		T	T	T	B	S	S																			T	T																						T	G	G	G	G																					S		S
Template Predicted Secondary structure
Template SS confidence
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
		243	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	G	R	Y	I	H	V	T	A	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	S	Y	Y	V	V	Y	V	F	S	K
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		832	.	.	.	.	.	.	.	840	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions