Job Description P36566 Confidence 97.61% Date Thu Jan 5 11:53:21 GMT 2012 Rank 300 Aligned Residues 129 % Identity 12% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		33	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																					.	.
Query SS confidence													.																					.	.
Query Sequence		D	L	D	R	V	L	A	E	M	G	P	.	Q	K	L	R	V	L	D	A	G	G	G	E	G	Q	T	A	I	K	M	A	.	.	E	R	G	H	Q	V	I	L	C	D	L	S	A	Q	M	I	D	R	A	K	Q	A	A	E	A	K	G	V	S	D	N	M	Q	F	I	H	C	A	A	Q	D	V	A	S	H	L
Query Conservation													.																					.	.
Alig confidence													.																					.	.
Template Conservation
Template Sequence		K	L	R	W	L	V	E	R	R	F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	K	N	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	M	L	M	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	K	P	S	E	I	S
Template Known Secondary structure									T	T	S											T		T	T	S							T	T	S	T	T											S	T	T	S								S	T	T	G	G	G						S			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																							.	.													.
Query SS confidence																							.	.													.
Query Sequence		E	T	P	V	D	L	I	L	F	H	A	V	L	E	W	V	A	D	P	R	S	.	.	V	L	Q	T	L	W	S	V	L	R	P	G	.	G	V	L	S	L	M	F	Y	N	A	H	G	L	L	M	H	N	M	V
Query Conservation																							.	.													.
Alig confidence																							.	.													.
Template Conservation
Template Sequence		D	T	L	L	C	D	I	G	E	S	S	P	S	A	E	I	E	E	Q	R	T	L	R	I	L	E	M	V	S	D	W	L	S	R	G	P	K	E	F	C	I	K	I	L	C	P	Y	M	P	K	V	I	E	K	L
Template Known Secondary structure		S											S																					T	T			S							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions