Return to main results Retrieve Phyre Job Id

Job DescriptionP36566
Confidence99.57%DateThu Jan 5 11:53:21 GMT 2012
Rank153Aligned Residues114
% Identity21%Templatec2pwyB_
PDB info PDB header:transferaseChain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a m1a58 trna methyltransferase
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40... ......50.........60..... ....70.........80.........90.........100.......
Predicted Secondary structure 


.








...














Query SS confidence 











.





















. . .









































Query Sequence  QDLDRVLAEMGP. QKLRVLDAGGGEGQTAIKMAER. . . GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS
Query Conservation    
   
     .   









     

  ...
  
  

                                  
Alig confidence 











.





















...








































.
Template Conservation   
   

  
 
 

 



 
 


  
  

      
 
   
        
                  
     .
Template Sequence  KDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE.
Template Known Secondary structure  TT

TT


TTSTTTSS





S
GGG

.
Template Predicted Secondary structure 
































.
Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150........
 
   108.110.........120.........130.........140.........150.
Predicted Secondary structure 












Query SS confidence 











































Query Sequence  HLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN
Query Conservation        
 
     
         
    
 




 
 
    
Alig confidence 










.....



























Template Conservation        
 
  .....    
   
      




 

   
 
Template Sequence  LEEAAYDGVAL. . . . . DLMEPWKVLEKAALALKPDRFLVAYLPN
Template Known Secondary structure 

TT
.....SS
GGGGS
Template Predicted Secondary structure 







.....







Template SS confidence 











































   159160......... 170.........180.........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions