Return to main results Retrieve Phyre Job Id

Job DescriptionP36566
Confidence99.46%DateThu Jan 5 11:53:21 GMT 2012
Rank181Aligned Residues118
% Identity14%Templatec2hteB_
PDB info PDB header:transferaseChain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60..... ....70.........80.........90.. .......100.....
Predicted Secondary structure 











..






...







Query SS confidence 


































. .


























. . .












Query Sequence  WQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAER. . GHQVILCDLSAQMIDRAKQAAEAKGVS. . . DNMQFIHCAAQDV
Query Conservation     
   
        









     

  ..
  
  

                   ...             
Alig confidence 


































..


























...












Template Conservation   
 
          
  

 

 
 
      
       
  



  

  

  
          
      
    
Template Sequence  HEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF
Template Known Secondary structure  TTSSS


TT
T
TT

S

GGGGSTTS
Template Predicted Secondary structure 






























Template SS confidence 















































































   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   106...110.........120.........130.........140.........150...
Predicted Secondary structure 














Query SS confidence 















































Query Sequence  ASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAH
Query Conservation          
 
     
         
    
 




 
 
      
Alig confidence 










.....































Template Conservation 
      

 
.....
 
      
       
 





       
Template Sequence  LENVTNTYDVI. . . . . IVDSSDNQNFYEKIYNALKPNGYCVAQCESLW
Template Known Secondary structure  T

S
.....






TT
Template Predicted Secondary structure 






.....












Template SS confidence 















































   145....150..... ....160.........170.........180.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions