Return to main results Retrieve Phyre Job Id

Job DescriptionP36566
Confidence62.45%DateThu Jan 5 11:53:21 GMT 2012
Rank391Aligned Residues106
% Identity9%Templatec1m67A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of leishmania mexicana gpdh complexed with inhibitor2 2-bromo-6-hydroxy-purine
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50..... ....60.........70.........80.........90 .........100.........110.........120.
Predicted Secondary structure 




..






..














Query SS confidence 









. .


































. .






























Query Sequence  LRVLDAGGGE. . GQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKG. . VSDNMQFIHCAAQDVASHLETPVDLILFHAV
Query Conservation   








..
     

  
  
  

                 ..                       
 
     
Alig confidence 









..


































..






























Template Conservation   

 




 

   
  

  
  
            
                  
    
        
 

  
  
Template Sequence  NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT
Template Known Secondary structure 

STT
S
TS
TTTSTT



TTS
TT
SS


Template Predicted Secondary structure 
































Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   122.......130.........140.........150.
Predicted Secondary structure 







Query SS confidence 





























Query Sequence  LEWVADPRSVLQTLWSVLRPGGVLSLMFYN
Query Conservation 
         
    
 




 
 
    
Alig confidence 





























Template Conservation               
          

    
Template Sequence  QFLRGFFEKSGGNLIAYAKEKQVPVLVCTK
Template Known Secondary structure  T




Template Predicted Secondary structure 






Template SS confidence 





























   96...100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions