Job Description P23837 Confidence 100.00% Date Wed Jan 25 15:20:44 GMT 2012 Rank 3 Aligned Residues 279 % Identity 12% Template c3d2rB_ PDB info PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp Resolution 2.03 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		P	L	L	W	V	A	A	W	W	S	L	R	P	I	E	A	L	A	K	E	V	R	E	L	E	E	H	N	R	E	.	L	L	N	P	A	T	T	R	E	L	T	S	L	V	R	N	L	N	R	L	L	K	S	E	R	E	R	Y	D	K	Y	R	T	T	L	T	D	L	T	H	S	L	K	T	P	L	A	V	L
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		T	S	F	A	F	L	R	Q	E	L	P	V	R	L	A	N	I	L	K	E	I	D	I	L	P	T	Q	L	V	N	T	S	S	V	Q	L	V	K	S	W	Y	I	Q	S	L	M	D	L	V	E	F	H	E	K	S	P	D	D	Q	K	A	L	S	D	F	V	D	T	L	I	K	V	R	N	R	H	H	N	V	V
Template Known Secondary structure																								T	S						T	S																			G	G	G	G	S		T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		287	.	.	290	.	.	.	.										.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		Q	S	T	L	R	S	L	R	.	.	.	.	.	.	.	.	.	S	E	K	M	S	V	S	D	A	E	P	V	M	L	E	Q	I	S	R	I	S	Q	Q	I	G	Y	Y	L	H	R	A	S	M	R	G	G	T	L	L	S	R	.	.	.	.	.	E	L	H	P	V	A	P	L	L	D	N	L	T	S	A	L	N
Query Conservation										.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation
Template Sequence		P	T	M	A	Q	G	I	I	E	Y	K	A	C	T	V	D	P	V	T	N	Q	N	L	Q	Y	F	L	D	R	F	Y	M	N	R	I	S	T	R	M	L	M	N	Q	H	I	L	I	F	S	D	S	Q	T	G	N	P	S	H	I	G	S	I	D	P	N	C	D	V	V	A	V	V	Q	D	A	F	E	C	S	R
Template Known Secondary structure																		T	T	T																															S	S					T	T	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		353	.	.	.										.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.										.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Query Sequence		K	V	Y	Q	.	.	.	.	.	.	.	.	.	R	K	G	V	N	I	S	L	D	I	S	P	E	I	S	F	V	G	E	Q	N	D	F	V	E	V	M	G	N	V	L	D	N	A	C	K	Y	.	.	.	.	.	.	.	.	.	C	L	E	F	V	E	I	S	A	R	Q	T	D	E	H	L	Y	I	V	V	E
Query Conservation						.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	C	D	Q	Y	Y	L	S	S	P	E	L	K	L	T	Q	V	N	G	K	F	P	D	Q	P	I	H	I	V	Y	V	P	S	H	L	H	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	H	Q	E	N	Q	P	S	L	T	P	I	E	V	I	V	V	L	G	K	E	D	L	T	I	K	I	S
Template Known Secondary structure									S												S	S	S	T	T	S																														T	T	T	S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		D	D	G	P	G	I	P	L	S	K	R	E	V	I	F	D	R	G	Q	R	V	D	T	L	R	P	.	.	G	Q	G	V	G	L	A	V	A	R	E	I	T	E	Q	Y	E	G	K	I	V	A	G	E	S	M	L	G	G	A	R	M	E	V	I	F	G	R	Q	H	S	A	P	K	D	E
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		D	R	G	G	G	V	P	L	R	I	I	D	R	L	F	S	Y	T	Y	S	T	A	P	T	P	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	N	L	Y	S	L	S	G	Y	G	T	D	A	I	I	Y	L	K	A	L	S	S	E	S	I	E	K
Template Known Secondary structure				S					G	G	G	T	T	G	G	G	S	T	T			S	S						S	S	S														T	T									T	T	T										S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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