Job Description P23837 Confidence 99.65% Date Wed Jan 25 15:20:44 GMT 2012 Rank 28 Aligned Residues 115 % Identity 19% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.						.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.				.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																											.	.	.	.	.											.																											.	.	.
Query SS confidence																											.	.	.	.	.											.																											.	.	.
Query Sequence		F	V	G	E	Q	N	D	F	V	E	V	M	G	N	V	L	D	N	A	C	K	Y	C	L	E	.	.	.	.	.	F	V	E	I	S	A	R	Q	T	D	.	E	H	L	Y	I	V	V	E	D	D	G	P	G	I	P	L	S	K	R	E	V	I	F	D	R	G	.	.	.	Q	R	V	D	T	L	R	P	G	Q
Query Conservation																											.	.	.	.	.											.																											.	.	.
Alig confidence																											.	.	.	.	.											.																											.	.	.
Template Conservation
Template Sequence		F	D	S	A	P	R	S	L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q
Template Known Secondary structure			S	S																					T	T	T	S		S											T	T	T										S					G	G	G						S													S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.		460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																			.							.
Query SS confidence																			.							.
Query Sequence		G	V	G	L	A	V	A	R	E	I	T	E	Q	Y	E	G	K	.	I	V	A	G	E	S	.	M	L	G	G	A	R	M	E	V	I	F	G	R	Q	H	S	A	P	K	D	E
Query Conservation																			.							.
Alig confidence																			.							.
Template Conservation
Template Sequence		G	I	G	I	S	A	A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N	T	S	T	N	E	P	D
Template Known Secondary structure		S														T											S	S	S	S											S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions