Job Description P23837 Confidence 100.00% Date Wed Jan 25 15:20:44 GMT 2012 Rank 5 Aligned Residues 237 % Identity 13% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.											.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	E	L	T	S	L	V	R	N	L	N	R	L	L	K	S	E	R	E	R	Y	D	K	Y	R	T	T	L	T	D	L	T	H	S	L	K	T	P	L	A	V	L	Q	S	T	L	R	S	L	.	.	.	.	.	.	.	.	.	.	R	S	E	K	M	S	V	S	D	A	E	P	V	M	L	E	Q	I	S	R
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	W	Y	V	Q	S	L	L	D	I	M	E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S
Template Known Secondary structure														T	T	S	S			T	T	S	T	T	T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.							.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.										.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		I	S	Q	Q	I	G	Y	Y	L	H	R	A	S	M	R	G	G	T	L	L	S	R	.	.	.	.	.	.	E	L	H	P	V	A	P	L	L	D	N	L	T	S	A	L	N	K	V	Y	Q	R	K	.	.	.	.	.	.	.	.	.	G	V	N	I	S	L	D	I	S	P	E	I	S	F	V	G	E	Q	N	D
Query Conservation																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H
Template Known Secondary structure													T	S	S	S		S	S		S		S		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.										.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		F	V	E	V	M	G	N	V	L	D	N	A	C	K	Y	C	L	E	F	.	.	.	.	.	.	.	.	.	V	E	I	S	A	R	Q	T	D	E	H	L	Y	I	V	V	E	D	D	G	P	G	I	P	L	S	K	R	E	V	I	F	D	R	G	Q	R	V	D	T	L	R	P	G	Q	G	V	G	L	A	V	A
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation																																																																							.	.
Template Sequence		L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	.	.	G	F	G	Y	G	L	P	I	S
Template Known Secondary structure																				T	T	T	T		S													S	S																			G	G	G	G		T	T	T	T					.	.		S	S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	T	E	Q	Y	E	G	K	I	V	A	G	E	S	M	L	G	G	A	R	M	E	V	I	F	G	R	Q	H	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	Y	A	K	Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L	K	A	L	S	T	D
Template Known Secondary structure								T	T									T	T											S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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