Job Description P23837 Confidence 98.26% Date Wed Jan 25 15:20:44 GMT 2012 Rank 55 Aligned Residues 99 % Identity 16% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.				.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.									.	.	.	.	.	.	430	.	.	.	.	.	.	.									.	.
Predicted Secondary structure																					.	.	.																											.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.																											.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		F	V	E	V	M	G	N	V	L	D	N	A	C	K	Y	C	L	E	F	.	.	.	V	E	I	S	A	R	Q	T	D	E	H	L	Y	I	V	V	E	D	D	G	P	G	I	P	L	S	.	.	.	.	.	.	.	.	K	R	E	V	I	F	D	R	G	Q	R	V	D	T	.	.	.	.	.	.	.	.	L	R
Query Conservation																					.	.	.																											.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																											.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	L	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E	K	K	V	T	G
Template Known Secondary structure																G	G	G	T		T	T										T	T	T	T								S	S					S			T	T	T	T										S	S	S			S				G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		P	G	Q	G	V	G	L	A	V	A	R	E	I	T	E	Q	Y	E	G	K	I	V	A	G	E	S	.	M	L	G	G	A	R	M	E	V	I	F	G	R	Q	H	S
Query Conservation																												.
Alig confidence																	.	.	.	.								.
Template Conservation																	.	.	.	.
Template Sequence		G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	.	.	.	.	K	F	T	V	E	T	A	S	R	E	Y	K	K	M	F	K	Q	T	W	M	D	N	M	G
Template Known Secondary structure				S	S									T			.	.	.	.									G	G	G	T									T	T	T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions