Job Description P0A7Z4 Confidence 100.00% Date Thu Jan 5 11:06:30 GMT 2012 Rank 10 Aligned Residues 121 % Identity 46% Template d1ynja2 SCOP info Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Resolution 3.20

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		G	C	A	V	T	E	V	E	I	D	G	V	L	H	E	Y	S	T	K	E	G	V	Q	E	D	I	L	E	I	L	L	N	L	K	G	L	A	V	R	V	Q	G	K	.	.	D	E	V	I	L	T	L	N	K	S	G	I	G	P	V	T	A	A	D	I	T	H	D	G	D	V	E	I	V	K	P	Q	H	V	I
Query Conservation																																													.	.
Alig confidence																																													.	.
Template Conservation
Template Sequence		G	T	A	V	T	S	V	Y	I	E	D	V	L	H	E	F	S	T	I	P	G	V	K	E	D	V	V	E	I	I	L	N	L	K	E	L	V	V	R	F	L	D	P	K	M	A	S	T	T	L	I	L	R	A	E	G	P	K	E	V	R	A	G	D	F	T	P	S	A	D	V	E	I	M	N	P	D	L	H	I
Template Known Secondary structure											T	T			S	S	S		B		T	T	B	S	S	B																		S	S			B									S	S					B	T	T	S			B	T	T	B			S	S		B
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	L	T	D	E	N	A	S	I	S	M	R	I	K	V	Q	R	G	R	G	Y	V	P	A	S	T	R	I	H	S	E	E	D	E	R	P	I	G	R	L	L	V	D	A	C	Y	S
Query Conservation
Alig confidence						.																								.	.	.	.
Template Conservation						.																								.	.	.	.
Template Sequence		A	T	L	E	.	E	G	G	K	L	Y	M	E	V	R	V	D	R	G	V	G	Y	V	P	A	E	R	H	.	.	.	.	G	I	K	D	R	I	N	A	I	P	V	D	A	I	F	S
Template Known Secondary structure				B		.	T	T														S								.	.	.	.				S	S	S	S			B
Template Predicted Secondary structure						.																								.	.	.	.
Template SS confidence
		130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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