Job Description P0A7Z4 Confidence 99.74% Date Thu Jan 5 11:06:30 GMT 2012 Rank 18 Aligned Residues 107 % Identity 18% Template d1twfc2 SCOP info Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Resolution 2.30

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		52	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																												.	.	.	.														.
Query SS confidence												.	.	.	.	.	.	.	.	.																																												.	.	.	.														.
Query Sequence		P	G	C	A	V	T	E	V	E	I	.	.	.	.	.	.	.	.	.	D	G	V	L	H	E	Y	S	T	K	E	G	V	Q	E	D	I	L	E	I	L	L	N	L	K	G	L	A	V	R	V	Q	G	K	D	E	V	I	L	T	L	N	K	.	.	.	.	S	G	I	G	P	V	T	A	A	D	I	T	H	.
Query Conservation												.	.	.	.	.	.	.	.	.																																												.	.	.	.														.
Alig confidence												.	.	.	.	.	.	.	.	.																																												.	.	.	.														.
Template Conservation
Template Sequence		P	T	L	A	I	D	S	V	E	V	E	T	N	T	T	V	L	A	D	E	F	I	A	H	R	L	G	L	I	P	L	Q	S	M	D	I	E	Q	L	E	Y	S	R	D	C	F	C	E	D	H	C	D	K	C	S	V	V	L	T	L	Q	A	F	G	E	S	E	S	T	T	N	V	Y	S	K	D	L	V	I	V
Template Known Secondary structure																S	S	S											T	S					T	T	G	G	G	S			T	T	T	S	S	S	S	S			T	T	T												S	S	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		118	.	120	.	.											.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	D	V	E	.	.	.	.	.	.	.	.	.	.	I	V	K	P	Q	H	V	I	C	H	L	T	D	E	N	A	S	I	S	M	R	I	K	V	Q	R	G	R	G	Y	V	P	A	S	T	R	I
Query Conservation							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.												.
Template Conservation																												.
Template Sequence		S	N	L	M	G	R	N	I	G	H	P	I	I	Q	D	K	E	G	N	G	V	L	I	C	K	L	.	R	K	G	Q	E	L	K	L	T	C	V	A	K	K	G	I	A	K	E	H	A	K	W	G	P
Template Known Secondary structure		S			T	T		S								S	T	T	S			S						.		T	T														T	T	T		G	G	G
Template Predicted Secondary structure																												.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions