Job Description P0A7Z4 Confidence 99.83% Date Thu Jan 5 11:06:30 GMT 2012 Rank 17 Aligned Residues 67 % Identity 33% Template d1doqa_ SCOP info SAM domain-like C-terminal domain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	D	P	I	L	L	R	P	V	D	D	L	E	L	T	V	R	S	A	N	C	L	K	A	E	A	I	H	Y	I	G	D	L	V	Q	R	T	E	V	E	L	L	K	T	P	N	L	G	K	K	S	L	T	E	I	K	D	V	L	A	S	R	G	L	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	E	E	E	L	D	L	P	L	E	E	L	G	L	S	T	R	V	L	H	S	L	K	E	E	G	I	E	S	V	R	A	L	L	A	L	N	L	K	D	L	K	N	I	P	G	I	G	E	R	S	L	E	E	I	K	E	A	L	E	K	K	G	F	T	L
Template Known Secondary structure					S	S									T												T	T			S							S						T	T	S	T	T																				S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions