Job Description P0A7Z4 Confidence 99.94% Date Thu Jan 5 11:06:30 GMT 2012 Rank 13 Aligned Residues 81 % Identity 100% Template d1cooa_ SCOP info SAM domain-like C-terminal domain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit Resolution UNK

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Show / Hide Conservation and Alignment quality

		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	P	I	L	L	R	P	V	D	D	L	E	L	T	V	R	S	A	N	C	L	K	A	E	A	I	H	Y	I	G	D	L	V	Q	R	T	E	V	E	L	L	K	T	P	N	L	G	K	K	S	L	T	E	I	K	D	V	L	A	S	R	G	L	S	L	G	M	R	L	E	N	W	P	P	A	S	I	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	P	I	L	L	R	P	V	D	D	L	E	L	T	V	R	S	A	N	C	L	K	A	E	A	I	H	Y	I	G	D	L	V	Q	R	T	E	V	E	L	L	K	T	P	N	L	G	K	K	S	L	T	E	I	K	D	V	L	A	S	R	G	L	S	L	G	M	R	L	E	N	W	P	P	A	S	I	A	D
Template Known Secondary structure								S	B	G	G	G	G	T			T	T	T						T	T	T			B						T	S						T	T	S	T	T																T	T			T	T				S	S	S	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		329
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		329

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions