Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7Z4
Confidence100.00%DateThu Jan 5 11:06:30 GMT 2012
Rank1Aligned Residues228
% Identity99%Templatec1bdfC_
PDB info PDB header:nucleotidyltransferaseChain: C: PDB Molecule:rna polymerase alpha subunit; PDBTitle: structure of escherichia coli rna polymerase alpha subunit2 n-terminal domain
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILE
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Template Sequence  MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRAILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILE
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TT

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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  ILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
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Template Sequence  ILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRI.
Template Known Secondary structure  T

SS
SSSGGGB


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   81........90.........100.........110.........120.........130.........140.........150.........
 
   161........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLR
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Template Sequence  . . . . . . HIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLR
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   160.........170.........180.........190.........200.........210.........220........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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